Insertion junction: CLIP2.006599_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006599
Chromosome:chromosome 17
Location:3391517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723250 CPP1,CPE1 chloroplast processing enzyme; (1 of 1) PTHR11851//PTHR11851:SF152 - METALLOPROTEASE // PROTEIN UCR-2.3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTTTCGACGCTGTCGTATTGCGTGGCGCGACCACGTGCACGCATGC
Internal bar code:GTTTGTAATCTGTGTTTATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1483
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCAACAGACCACACGAAC
Suggested primer 2:CCAGTTGTCGTTGGCAAAGG