Insertion junction: CLIP2.006609_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006609
Chromosome:chromosome 6
Location:2657997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270400 GT90-6,GT90F6 GT90 family protein 6; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACTTTCCGCGGGCGCTGCCCCTGGCGCGGTACCGGGATGAGCAGGTGT
Internal bar code:TTGGGCGGCAGAGCTGGTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1175
LEAP-Seq percent confirming:24.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGGAGTTGTGCTCGTCT
Suggested primer 2:ACTCCTCCTCGCTTCCATCT