Insertion junction: CLIP2.006627_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006627
Chromosome:chromosome 16
Location:4531412
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671500 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAAGGGGAGGCGGTAAGCTGACAGGAGAGGCGGGCACAACTGGCGAGT
Internal bar code:GCGGTGGCGAATTATGTAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1092
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GGAATTGCTGCGGCTACATG
Suggested primer 2:ACCCCCACTATCACTACCCC