Insertion junction: CLIP2.006628_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006628
Chromosome:chromosome 16
Location:5816207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679950 RFC3 DNA replication factor C complex subunit 3; (1 of 1) PTHR11669:SF1 - REPLICATION FACTOR C SUBUNIT 3 3'UTR
Cre16.g680000 ATP5 (1 of 1) K02137 - F-type H+-transporting ATPase subunit O (ATPeF0O, ATP5O, ATP5); Mitochondrial ATP synthase subunit 5, OSCP subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTACCCGCTTGAGGACTGCGCGTGGCATGTGCTGAGTGCCTGCATGTA
Internal bar code:TGGTGACTATCAGAGTATCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1856
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCTGAAAGTGCTTGCGC
Suggested primer 2:GACAAGTTGTTGGCTGGCTG