Insertion junction: CLIP2.006639_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006639
Chromosome:chromosome 12
Location:1638016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486700 FAP271 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt); Flagellar Associated Protein 271 3'UTR
Cre12.g486750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAACCCACACCACCCGCCGCTGTAGAACGGTCGTCCCCGACGACCCC
Internal bar code:CTGAAGGTGTGGCAGGTAGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1358
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGTTGTAGGCAGTCACG
Suggested primer 2:GCATCTCCAGTGTGGTGTGA