Insertion junction: CLIP2.006644_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006644
Chromosome:chromosome 8
Location:3978895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382515 (1 of 1) PTHR22838//PTHR22838:SF0 - WD REPEAT PROTEIN 26-RELATED // WD REPEAT-CONTAINING PROTEIN 26 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGGTGGAGGAGAGAGGCAGGTGGCTGCTGGCTGTGGCGTCCCGGCTGG
Internal bar code:TAATGACCAAGTAACGAGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:544
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTATTTACAACCCCCGCC
Suggested primer 2:AAAGTTTGAAGTGCCGACGC