Insertion junction: CLIP2.006646_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006646
Chromosome:chromosome 1
Location:2180490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g012200 (1 of 3) PF00651//PF03110 - BTB/POZ domain (BTB) // SBP domain (SBP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAAGCCTCACTGTCCACTCCCTGGATGGGCAGTTCCTTGCCAGTGGC
Internal bar code:CCGGGTACCTCTTCTGTAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:674
LEAP-Seq percent confirming:47.619
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGTTAGGGGTGTATCCG
Suggested primer 2:TACACACCGACACGTGTCTG