Insertion junction: CLIP2.006649_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006649
Chromosome:chromosome 3
Location:143298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143947 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGCCCTATTGTATTGTTACAGCGGCTTAGTGAAGCTCCCAAGACAAT
Internal bar code:TCAGACATTGTAACAAAAACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1660
LEAP-Seq percent confirming:31.3725
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATCGCGATCAAGACAC
Suggested primer 2:CGAGGACTATCACTCCGTGC