Insertion junction: CLIP2.006672_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006672
Chromosome:chromosome 3
Location:5197640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181500 DPE1,STA11 Disproportionating enzyme 1; (1 of 1) PTHR32438:SF5 - 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATGTTGGAGGAGTTTGCACGGCACCTCACTGGTGGTCCAGGCGTCTT
Internal bar code:TCTACAGGGTGAGGCATGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2924
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCGTGTCATGAGCACATA
Suggested primer 2:CCTTGTACCGTTCCGTGTCA