Insertion junction: CLIP2.006693_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006693
Chromosome:chromosome 12
Location:5241502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527600 (1 of 1) K12865 - polyglutamine-binding protein 1 (PQBP1, NPW38) 3'UTR
Cre12.g527650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACGGTGATGTTGCTCACTTCAGTGCGAGGCCTTGTGAAGTGGCGGCG
Internal bar code:CGTTCTTTCAGCGCAACGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3896
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTCTGTGCGGAGTGTA
Suggested primer 2:CACCACCAGGCCACAATTTG