Insertion junction: CLIP2.006696_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006696
Chromosome:chromosome 1
Location:4545514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031100 MET1,TEF30 Thylakoid enriched fraction, 30-kDa protein; (1 of 3) PTHR17130//PTHR17130:SF24 - MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25 // GAN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTAAAGACAAGGTGAGACGGGCAGCTTTTGTGTGGCCGCATGGACAAT
Internal bar code:TATCTTTGGTTCGGGTTCCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:698
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTGCCTGGAGAGGAAGG
Suggested primer 2:CAACCTAGAGCTGGGAGTGC