Insertion junction: CLIP2.006697_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006697
Chromosome:chromosome 1
Location:5548204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039550 PLAP1,PLP1 Plastid lipid associated protein 1; (1 of 230) IPR017986 - WD40-repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTGCCTGCCGGACGCGGCCACTACAGTCAGCCCACCGCCCCACCCTG
Internal bar code:CTAGGGGGTAACGTCTCTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:5305
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGTTGACGTCGCTGTGCT
Suggested primer 2:AACGGAGCCAGAAGACACAG