Insertion junction: CLIP2.006697_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006697
Chromosome:chromosome 1
Location:5548204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039550 PLAP1,PLP1 Plastid lipid associated protein 1; (1 of 230) IPR017986 - WD40-repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGTGGCGCGTGTTTGACGATGGGGTTGACACGCGGCAATGCGGGACTG
Internal bar code:CTAGGGGGTAACGTCTCTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1352
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AACGGAGCCAGAAGACACAG
Suggested primer 2:TAAGTTGACGTCGCTGTGCT