Insertion junction: CLIP2.006699_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006699
Chromosome:chromosome 13
Location:4254704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g592050 DAL1 Allantoinase; (1 of 1) 3.5.2.5 - Allantoinase intron
Cre13.g592100 (1 of 1) PF00097//PF00628 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // PHD-finger (PHD) 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCTCCACCTCCCAACCTTACAGCGCCGACATCAGTACCCATGACCCC
Internal bar code:AATCTGGTCCGACGGGTGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:923
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATGTTTCAACGCCAGTT
Suggested primer 2:TAATCGACTGCACCCGATCG