Insertion junction: CLIP2.006701_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006701
Chromosome:chromosome 16
Location:5520564
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCCAATGTTCCAAAACTGCGTTTTCACCATCACGCAACTCTCATAGG
Internal bar code:GGGCTTTCTCTCGGGGCGCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1512
LEAP-Seq percent confirming:74.2857
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTGTCGTATCACTACCG
Suggested primer 2:CTGTGTACTGAAGGCGTGGT