Insertion junction: CLIP2.006709_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006709
Chromosome:chromosome 12
Location:9124538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543900 PTP6 Protein tyrosine phosphatase; (1 of 2) 3.1.3.2//3.1.3.48 - Acid phosphatase / Phosphomonoesterase // Protein-tyrosine-phosphatase / PTPase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAAGCGGTTGTGCTAGACACCTGCGTGAGTGCCCTGTGAAGCGTGCAG
Internal bar code:TCTTGCGCCAAACTGTATTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1765
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGCAGTGTGGATGCAAC
Suggested primer 2:CGCCGTTGAATGAATCCGAC