Insertion junction: CLIP2.006716_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006716
Chromosome:chromosome 14
Location:3389599
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g629920 AMT1B,AMT2 (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP); Ammonium transporter (AMT) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGAAAGAAAGCCCCCGCGCCATGACTGTGACGGCGGCACTGCAAAGT
Internal bar code:TGAATCGAAGCGACCTCGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1209
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGCGTTGTTGAGCTTGC
Suggested primer 2:CAGCAGCACGATGATTGACG