Insertion junction: CLIP2.006717_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006717
Chromosome:chromosome 5
Location:82299
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242000 CHLD,CHLD1 (1 of 1) K03404 - magnesium chelatase subunit D (chlD, bchD); Magnesium chelatase subunit D, chloroplast precursor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACACTTGCAACAACCCACCCCGGCTCCCCTCGCCCTCGCTTCTGTCGC
Internal bar code:AGAGTACACGCACAGGGAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3033
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGTTTGTTTGTTGCGTG
Suggested primer 2:GCCACTGCTGGTACTCCAAT