Insertion junction: CLIP2.006719_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006719
Chromosome:chromosome 16
Location:1923365
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCACGCGCGTCACGGTCCGTGATGCGACTCAGCAGCATGCACTGTTGC
Internal bar code:ATTGTGTGTTACCTTTGGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGCAAGGAAGTTCAAGC
Suggested primer 2:CGAGGCTGTCAGTCCAACTT