Insertion junction: CLIP2.006724_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006724
Chromosome:chromosome 3
Location:1974185
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155600 (1 of 2) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATATATGGTGCCGTGTCGCAGGAAGCCGGCCCGGTGGCGGCCGCGCTG
Internal bar code:GAGCCTCGCTTGGACCGAGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2331
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGCTGTTGTCGTTGTG
Suggested primer 2:ACTGAAACTCACAGCTCCCG