Insertion junction: CLIP2.006724_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006724
Chromosome:chromosome 3
Location:1974198
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155600 (1 of 2) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACGATCGTCACGTCGTCATGCCGTTACAGCCCCCGCCATGGCAGTCCG
Internal bar code:TTGTCTCCATTTGTTTGCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4739
LEAP-Seq percent confirming:73.7705
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGAAACTCACAGCTCCCG
Suggested primer 2:CTGTGGCTGTTGTCGTTGTG