Insertion junction: CLIP2.006728_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006728
Chromosome:chromosome 6
Location:3718794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278159 CRCO,CO,CON1,CONSTANS CONSTANS-like protein involved in circadian rhythms; (1 of 1) PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACAAGGTTGTTTGCGCCTTTGCAGGTCGCTGCGCGCCATACCCGCTTC
Internal bar code:ATTGTGTCGAAACACAGAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4747
LEAP-Seq percent confirming:96.6942
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:121

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCGTAAGGGAATGCAGC
Suggested primer 2:AGGTGACAGCAGTGTACGTG