Insertion junction: CLIP2.006737_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006737
Chromosome:chromosome 13
Location:3883685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589650 (1 of 1) PF08424 - NRDE-2, necessary for RNA interference (NRDE-2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCGCGTGAGGGAGTGGCCCCGATGCGGGCAGCGTGCATGCAGTACAG
Internal bar code:CATTCTAAATGGCTACCGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:818
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGAGTACAACACAGCAGT
Suggested primer 2:ATGCACACAGTGAAGAGCGA