Insertion junction: CLIP2.006744_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006744
Chromosome:chromosome 17
Location:3303507
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722300 (1 of 26) IPR017850 - Alkaline-phosphatase-like, core domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTTCGTCCGGCAGGCAAGAGCACGATGGCCCTTGCTTGGGCACTTGT
Internal bar code:CGTGACACGGTCTATTAACCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1612
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACAGTGAGGAGTTCGGA
Suggested primer 2:AACAGAAGAGTGTCGCCCTG