Insertion junction: CLIP2.006754_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006754
Chromosome:chromosome 1
Location:1356448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007050 CPLD11 Conserved in the Plant Lineage and Diatoms; (1 of 2) PF11267 - Domain of unknown function (DUF3067) (DUF3067) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAAACCGTGGGGTTCCTGGGCTCCAGCGGCTGTGATGATAAGCGCTGT
Internal bar code:CAATGTGGAAGTTGGCATTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1621
LEAP-Seq percent confirming:7.97101
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:127
LEAP-Seq n unique pos:138

Suggested primers for confirmation by PCR

Suggested primer 1:GATACGTAGGTGCGACAGGG
Suggested primer 2:GCAACGCCGTCATACACATC