Insertion junction: CLIP2.006766_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006766
Chromosome:chromosome 8
Location:2490828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372450 PSBQ1,OEE3, PSBQ (1 of 1) K08901 - photosystem II oxygen-evolving enhancer protein 3 (psbQ); Photosystem II Oxygen Evolution Enhancer protein 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCTGAAATGCTCACCGGCGGGAGGCCACGGCGGGGCGGGTAGCAACCT
Internal bar code:TTATCAATGGTCTCCGATGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1488
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGGAGCTTGGAAGGGAG
Suggested primer 2:GGAAACATGCCGCACCTTTT