Insertion junction: CLIP2.006773_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006773
Chromosome:chromosome 3
Location:5063668
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180000 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCTTCAAGCCCTCGGAAGCGTTCCAGGCATGCCACGACACCCCCGCA
Internal bar code:CCGGAGCTTGGGTTGGGTATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2909
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCAACACATCAAGCACA
Suggested primer 2:TGAGGAGAGGTAGTCCAGGC