Insertion junction: CLIP2.006784_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006784
Chromosome:chromosome 4
Location:3648561
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre04.g228750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGGATGTGAAGTCCAGACCCCGCGTCACACGCCTGTGCGACACCGACC
Internal bar code:TTCGACAGCGTAGTCCGTCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:865
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TAGATGGGCTTGCAAGGGTG
Suggested primer 2:GAGCGCGTGTATGTCCCATA