Insertion junction: CLIP2.006789_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006789
Chromosome:chromosome 2
Location:2556401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g092550 TPR1 (1 of 1) 6.2.1.4 - Succinate--CoA ligase (GDP-forming) / Succinyl-CoA synthetase (GDP-forming); Tetratricopeptide-repeat protein 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGGGGCGTCTACCAGCAGCAGCAGCAGTAGCAGCAGTGTCGGCGCGGG
Internal bar code:AAGTACTGAATGCGACTTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4655
LEAP-Seq percent confirming:92.6829
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTTGTCGCAGCCACACAT
Suggested primer 2:GGTAAGGTTCGGATAGCGGG