Insertion junction: CLIP2.006790_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006790
Chromosome:chromosome 15
Location:5301114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g734548 PPD2 Pyruvate phosphate dikinase; (1 of 1) 2.7.11.32//2.7.9.1 - [Pyruvate, phosphate dikinase] kinase / Pyruvate, phosphate dikinase regulatory protein // Pyruvate, phosphate dikinase / Pyruvate,phosphate dikinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTGTGTGCACGCCTCCCTTCCCCGTCCACCTTATAATCTATGGCGAA
Internal bar code:TGCCACTCAGACTTAATCGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:246
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCCACGCTTTGTTTGTG
Suggested primer 2:CTAGAGGGTGTGGGATGGGA