Insertion junction: CLIP2.006792_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006792
Chromosome:chromosome 2
Location:3472884
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098950 SYP72 Qc-SNARE protein, SYP7-family; (1 of 2) K08506 - syntaxin of plants SYP7 (SYP7) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGCACCACCTGGCATAAAAGACTTGGCATTTGTGCATGACTGCTTCA
Internal bar code:GAGTTTGCCCGGGGCCCAACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4278
LEAP-Seq percent confirming:93.8775
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTGTTCCAAACGTGCCC
Suggested primer 2:CCGATCGACTCCTCTTGACG