Insertion junction: CLIP2.006793_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006793
Chromosome:chromosome 12
Location:8874106
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g546150 PETM,PETM1 Chloroplast cytochrome b6f PetM subunit; (1 of 1) PF08041 - PetM family of cytochrome b6f complex subunit 7 (PetM) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTCAGCCTCGCCGGCAATCATGGCCAGCTCGTTCACGGCCTTGGTGGC
Internal bar code:AGGGGAAGTAGCTAAAGGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:46
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGGGAAGCGAAATAGCG
Suggested primer 2:TGCTGAGTGCTTCCTTGGAG