Insertion junction: CLIP2.006795_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006795
Chromosome:chromosome 5
Location:2152355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237050 CGLD27 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR34214:SF3 - GB|AAC18972.1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCACGCAGCCGGCTCCGTAGTCCCTGCGGCACAGCCACACGCACCAGG
Internal bar code:ATAATGACATGTTTGTGTCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1913
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGATCTTGACTGACGGCGTG
Suggested primer 2:TAGGAACACAGACACGGTGC