Insertion junction: CLIP2.006797_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006797
Chromosome:chromosome 9
Location:5773037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g410950 NIA1,NIT1 Nitrate reductase; (1 of 1) 1.6.2.2//1.7.1.1 - Cytochrome-b5 reductase // Nitrate reductase (NADH) / Nitrate reductase (NADH(2)) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTGCCCGAGAGAGTGTGTGCACGTGCTAGTTTTGGAGTCAGGCACCGC
Internal bar code:AAGGACAAGGTATAAAATATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2173
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCAGCTCTCCATGGTCCT
Suggested primer 2:CGAACCAACCAACACCGAAC