Insertion junction: CLIP2.006800_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006800
Chromosome:chromosome 12
Location:508331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494250 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTTGAAGTGCCAATGTCTAGTGCGGGGGGGTGCAGAGGCACAGTTTT
Internal bar code:TACATTGATACGGTACCCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:922
LEAP-Seq percent confirming:77.4194
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCTACACACATGTACGG
Suggested primer 2:AAGAACTCAGCGAGCAACGA