Insertion junction: CLIP2.006803_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006803
Chromosome:chromosome 8
Location:3469325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378650 CGl131 (1 of 18) IPR011051 - RmlC-like cupin domain; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACACACGCGCGCACACACACACACATACACATACACACACACGCA
Internal bar code:GCCCGGGTTGCAACTGGAGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2333
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTCCGTCAAGGTCGTTC
Suggested primer 2:TCCGGTAGTCGTGTGTGTTG