Insertion junction: CLIP2.006811_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006811
Chromosome:chromosome 11
Location:2489420
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095111 VSR1 Vacuolar Sorting Receptor; (1 of 1) PTHR22765//PTHR22765:SF56 - RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING // VACUOLAR-SORTING RECEPTOR 5-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGACCGCCTCGACCACATCAACAACCACTTGGGACTGGTGACGCGGG
Internal bar code:AAGAACCATTAATCAACGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:731
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTACGTCAACCCCATGA
Suggested primer 2:GCTTGCAATCCCACGCTATG