Insertion junction: CLIP2.006819_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006819
Chromosome:chromosome 2
Location:6830908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388356 OPR7,TBC2 Translation factor for chloroplast psbC RNA; (1 of 19) PTHR21228//PTHR21228:SF20 - FAST LEU-RICH DOMAIN-CONTAINING // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGCGAGGCGACATGCGGTCCTGCGGGTGGGCGCAGGCGGGGAGTGAG
Internal bar code:TTCGTGGCCGAAATTTTTCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1232
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGAACAGGTGGGAGCGAATG
Suggested primer 2:CTGGCCACACACTCATTCCT