Insertion junction: CLIP2.006821_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006821
Chromosome:chromosome 12
Location:1778671
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485750 CGL128 (1 of 1) PTHR13420//PTHR13420:SF5 - UNCHARACTERIZED // UPF0235 PROTEIN; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGTATGCTCGTTCGTGTCCACGATGTAAGCCCCGTCCGTTCGCCGCC
Internal bar code:CTAATAGTAGGGTGATTGCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1722
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTCAGCACGAACTGGACA
Suggested primer 2:CCTCTTCCTCCTCCTCCTCC