Insertion junction: CLIP2.006835_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006835
Chromosome:chromosome 11
Location:648910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467613 (1 of 1) IPR000742//IPR001881 - EGF-like domain // EGF-like calcium-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCGAGGGTGCAATTGGAGGAGGAGAGCAGCACCGCCCTGCGCGAGGTG
Internal bar code:TATGAACTTCTGTCTCAGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1256
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTCTCGGGTGAGTTGGA
Suggested primer 2:ATCAGGCCTGTGTGGGAAAG