Insertion junction: CLIP2.006835_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006835
Chromosome:chromosome 12
Location:6312939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536800 CGL52 (1 of 8) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358); Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGACTATTGCGACGACTTCGTGTGCACCAGCTCGCCCGCTGTGGAGC
Internal bar code:TTGGTCTAGTTAGTCCGGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1147
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCTCCCTCCTCTCACC
Suggested primer 2:CGGTGGCAGTCAGTGTTAGT