Insertion junction: CLIP2.006837_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006837
Chromosome:chromosome 16
Location:2421611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659850 CGL37 conserved protein related to shikimate kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTGCGCAGCCCGCGCAGCAGCTCAGCCTCAGTCGCCACTAGGGGGGG
Internal bar code:GATTTCTCGCGTGTAAGAGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1454
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCATTGTCAGGCCTGTAA
Suggested primer 2:TCGCACTGCTGACATGACTT