Insertion junction: CLIP2.006841_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006841
Chromosome:chromosome 9
Location:5317856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407501 (1 of 5) 3.2.1.3 - Glucan 1,4-alpha-glucosidase / Lysosomal alpha-glucosidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCCCCGCCCGGCTAGGCGTCGTGGGAACTGTGCACACCCCTTCCAGT
Internal bar code:CCTAGGTGCCAACGTAATACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1918
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCACGACGCACTTCAAT
Suggested primer 2:CAGTTGCATAGCGAGCGTTC