Insertion junction: CLIP2.006843_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.006843
Chromosome:chromosome 14
Location:3464097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630450 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGTCACTCAGCCCAGCCCGCCCTGGCCCAATCCATTTTGCCGATCTG
Internal bar code:AGTATAAGCAGTTGCTGCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1817
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTAGCCGACAAGCAAGT
Suggested primer 2:GAGATGTCCATGCCACCACA