Insertion junction: CLIP2.006849_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.006849
Chromosome:chromosome 3
Location:7639224
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g204350 CLPR4 (1 of 3) PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; inactive subunit of chloroplast ClpP complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGAGGTGGGGAGTGGGATAGGACAGGGTGCTTTGGCGGAAGTGGGGA
Internal bar code:CTCATCACCACACGGGATTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:167
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCCTCATCAAAGTCACA
Suggested primer 2:ATGATGAAGGGCGTGCAGAA