Insertion junction: CLIP2.006859_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.006859
Chromosome:chromosome 4
Location:3568212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228450 CPL10 (1 of 1) PTHR36716:SF2 - F3H9.20 PROTEIN; Conserved in the Plant Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCTGTGACACACATCAGGAGTGTTGCATGCGGCACGGGTTCGCGCCTT
Internal bar code:TTGTTATGGTCGAGTATTCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1440
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGTGAGGGGGATTACAA
Suggested primer 2:CTATGAGCTGGCTTACCGGG