Insertion junction: CLIP2.006866_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006866
Chromosome:chromosome 17
Location:3777408
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g726750 SHK1,SHKA1,DHAPS1 (1 of 1) 2.5.1.54 - 3-deoxy-7-phosphoheptulonate synthase / Phospho-2-oxo-3-deoxyheptonate aldolase; DHAP synthetase 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTGCGGCATGGACACCAACATGCCCTTCATGCGCGAGACTGAGTTC
Internal bar code:TTAGGGCTTGAAGTTTGAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:691
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCGTGCACGTCGAAGAA
Suggested primer 2:GCCGGAGTACCTCGATAAGC