Insertion junction: CLIP2.006868_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006868
Chromosome:chromosome 13
Location:1565525
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573000 E2FR1 (1 of 2) PTHR13271//PTHR13271:SF44 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE SMALL SUBUNIT N-METHYLTRANSFERASE I-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGTAGCCGCATGAGTGGGGCGGTGGGGCGGTGAAGGGACGGGGGTG
Internal bar code:AGTTGTTTTGCACGTGATTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1059
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTGATCCGGTGGTGGTTGAT
Suggested primer 2:GCTGCTCATGTCGTACGAGA