Insertion junction: CLIP2.006871_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006871
Chromosome:chromosome 1
Location:6109473
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g043350 CAO1,CAO Chlorophyllide a oxygenase, chloroplast precursor; (1 of 1) K13600 - chlorophyllide a oxygenase (CAO) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACGCAGTCGCGCGTGGAGCAGAACCTACAGCGCGTGAATGAGCTGAAG
Internal bar code:ACTGTCAATAGATTCTAAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:752
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCCCTCCTCAATCTCCAT
Suggested primer 2:AGCTGAGCATGGATTGGCTT