Insertion junction: CLIP2.006873_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.006873
Chromosome:chromosome 11
Location:1221471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467689 PETC1,PETC (1 of 1) K02636 - cytochrome b6-f complex iron-sulfur subunit (petC); Chloroplast cytochrome b6f Rieske iron-sulfur center subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTTCGCTGCTTCCCATACCCACGTGTCTGGGTTTCCTGCCGTGGAAG
Internal bar code:TTCAGGGATCTTATTCGCATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3157
LEAP-Seq percent confirming:99.115
LEAP-Seq n confirming:112
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGAGGAGATGACAAGGGC
Suggested primer 2:TTGGTACATGGCGCTGATGT